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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015890461.1_cds_XP_016445169.1_40154
CDS Infomation

[gene=LOC107770379] [db_xref=GeneID:107770379] [protein=lysM domain receptor-like kinase 3] [protein_id=XP_016445169.1] [location=complement(join(9765..9929,10399..10506,10992..11139,11225..11322,11406..11557,11641..11746,11861..11950,12042..12187,12413..12712,13570..13647,14442..15039))] [gbkey=CDS]
Sequence

ATGAATCATATTCAACCTGCTTTTCTTGCAATTCTTTGTCTGTTCGCCATTTTTCAAACA
ATCCCTCTCTGTTCATCAGCTCCACTAAACTGTACGGACGCTGGCCGTTTGTGCACTTCT
TTCTTGGCTTTTAAGCCCAGCCCAGAAGACACTCTACCAGTTATTCAAAGCATGTTTGAT
GTGTTACCTAATGATATAACTATTGAAGGCAATGGTAAAGGTTATGTTTTTATAAGAAAG
AACTGTACTTGTGCTTCTGGGATTAACAAGTACTTGACAAACTCCACATTTACTGTTAGA
AAAAACAATGGATCTGTGTATAATATTGTTCTTGATGCCTATAATGGGTTGGCTTATTTT
CCCTCGAATTTTACAAGGGAGGCAAAGAAAGGGGCAGTGGTTTCATTGAAGCTCATGTGT
GGTTGCTCAAGTGGGCTGTGGAATTATCTTATGAGTTATGTGATGAGAGATGGGGATACT
GTACAGTCTATGTCAAGTAGGTTTGGGGTTAGTATGGATAATATTGAGACTGTTAATGGA
ATTGCTAATCCTGATAATTTCACTGTGGGCTCTTTATACTATGTGCCATTGAATTCAGTT
CCTGGTGATCCATATCCTGTGGAAAATCACACCGTTCCTGCTCCTGTTCCAGCACCTGCT
GCTGCTGATATTTCAGAAATTAAGGAGAATCATAAGAGTCATGCTCTTTACTGGTGGATA
ATTGGGGGTTTGGGTGTTGGTCTTCTACTCCTAATTGCCGTCATTCTTGCTTTTGTTTCC
TGGAGGTCGTCAAGTTGTTTTTCCAGAAGTGAGAGAAGTCACTCAGCAGGTTCAAACGAG
AAGATTTCTCATAAGTTCCAGGTTCTTCGAAATACAAGTTTCTGTTGTGCATCAGGAAGG
TACATCTGCGGTGATTCAGGGGACCGGAAAGAACCTAATGGGGAATCTAGTGACCAACAG
ATGAATATTCCAAAAGTTATAGGAACTGATGTCTTTGACATGGAAAAACCTCTTGTTTTC
ATCTATGAAGACATTCTATCTTCTACTGATGGATTCTCTGACTCCAATCTTCTTGGTCAT
GGAACCTATGGTTCTGTCTATTACGCCATTCTCCGCAACCAGGAAGTTGCAATCAAAAGA
ATGACAGCCACTAAAACAAGAGAGTTTACTGCTGAGATGAAAGTTTTATGTAAAGTTCAT
CATTTGAATTTGGTAGAATTGATCGGTTATGCTGTCAGTAATGATGAACTATTCCTAGTT
TATGAATATGCCCAGAAGGGTTCTCTCAAATGCCACTTGCATGATCCTCAGAATAAAGGC
CATACACCGCTCTCTTGGATCATGAGAGTCCAAATTGCACTTGATGCTGCTAGAGGTCTG
GAATACATTCATGAGCACACCAAGCCGCATTATGTGCATCGAGATATAAAGACAAGCAAC
ATCCTTCTTGACGATTCTTTTAGAGCAAAGATTTCAGATTTTGGTTTGTCAAAACTTATG
GGGATAACGAATGACGGAGAAGCCTCTGCAACACGAGTTGTTGGAACCTATGGCTATGTA
GCTCCAGAGTATTTGAGGGACGGCTTGGCAACTACGAAGACTGATGTGTATGCATTTGGC
GTTGTCCTTTTTGAGATGCTGACAGGGAAAGAAGCCGTCACCCGGACTGAAGGCAATGTG
ATGAAAACTGCAGAAAGACGTTCCTTAGTGTCCCTTATGCTGGCAGCTCTGAGGAACTCA
CCAGACTCCACTAGTATGACAAGCTTAAAGGAGCAGCTCGATCCCAGTTTGATGGACTTA
TACCCTTCTGACTGTGTTTTCAAGGTGGCTATGCTGGCTAAGCAATGTGCGGATGATGAT
CCAATATTAAGACCAGACATGAAGCAAGTGGTGATTATGCTTTCTCAAATACTCTTATCT
TCTGTGGAATGGGAAGCAACTCTTGCTGGGAATAGCCAAGTGTTTAGTGGCATTGTGCAG
GGAAGATAA

Peptide Sequence

PEP ID

XP_016445169.1
PEP Infomation

PREDICTED: lysM domain receptor-like kinase 3 [Nicotiana tabacum]
Sequence

MNHIQPAFLAILCLFAIFQTIPLCSSAPLNCTDAGRLCTSFLAFKPSPEDTLPVIQSMFD
VLPNDITIEGNGKGYVFIRKNCTCASGINKYLTNSTFTVRKNNGSVYNIVLDAYNGLAYF
PSNFTREAKKGAVVSLKLMCGCSSGLWNYLMSYVMRDGDTVQSMSSRFGVSMDNIETVNG
IANPDNFTVGSLYYVPLNSVPGDPYPVENHTVPAPVPAPAAADISEIKENHKSHALYWWI
IGGLGVGLLLLIAVILAFVSWRSSSCFSRSERSHSAGSNEKISHKFQVLRNTSFCCASGR
YICGDSGDRKEPNGESSDQQMNIPKVIGTDVFDMEKPLVFIYEDILSSTDGFSDSNLLGH
GTYGSVYYAILRNQEVAIKRMTATKTREFTAEMKVLCKVHHLNLVELIGYAVSNDELFLV
YEYAQKGSLKCHLHDPQNKGHTPLSWIMRVQIALDAARGLEYIHEHTKPHYVHRDIKTSN
ILLDDSFRAKISDFGLSKLMGITNDGEASATRVVGTYGYVAPEYLRDGLATTKTDVYAFG
VVLFEMLTGKEAVTRTEGNVMKTAERRSLVSLMLAALRNSPDSTSMTSLKEQLDPSLMDL
YPSDCVFKVAMLAKQCADDDPILRPDMKQVVIMLSQILLSSVEWEATLAGNSQVFSGIVQ
GR

Transcript Sequence

Gene sequence data has not been registered.